| Name | Description | Tech | Link |
|---|---|---|---|
| GeneScout | De Novo Small ORF Discovery Using Entropy Analysis | R | View |
| BioGA | Apply multi-objective genetic algorithms to genomic data for biologically informed feature selection and pattern discovery | C++ | View |
| pleior | Identify and characterize pleiotropic SNPs from GWAS data to uncover shared biological mechanisms across multiple traits and diseases | R | View |
| AGen | Adversarial Genetics: GAN-based Synthetic Genetic Data generation for privacy-preserving research | R | View |
| alimap | Command-line tool for analyzing and filtering genomic data in BAM files with efficient processing | Shell | View |
| miRBD | Detecting potential regulatory microRNA-binding disruptions in the APOE locus using 1000 Genomes allele diversity | Jupyter Notebook | View |
| AD-SHARP | Alzheimer's-SNP Harmonization and Risk Predictor for genetic risk assessment | Python | View |
| GenoRisk | Genetic Risk Assessment Tool for Alzheimer's Disease | Python | View |
| gwas | Analyze the entire set of GWAS summary statistics from the GWAS Catalog | R | View |
| feat | Feature extraction and analysis tools for genomic data | R | View |
| Name | Description | Tech | Link |
|---|---|---|---|
| CMD-WebApp | Web application for clinical metabolomics data visualization and analysis | JavaScript | View |
| mwbenchr | Software interface for the Metabolomics Workbench REST APIs, enabling direct and structured access to metabolomics data | R | View |
| ADNIMetabo | Alzheimer's Disease Neuroimaging Initiative (ADNI) Metabolomics and Related Datasets; Processed and analyzed | R | View |
| multi.fluid.ad | Multi-biofluid metabolomics analysis for Alzheimer's disease and dementia with Lewy bodies | R | View |
| PRIDEArchiveR | R Client for the PRIDE Archive Proteomics Database, enabling seamless data retrieval and analysis | R | View |
| Name | Description | Tech | Link |
|---|---|---|---|
| neuroinsilico_mvp | Cloud-deployable multi-omics analytics for early Alzheimer's risk detection | Python | View |
| adrr | Curated collection of accessible datasets, tools, and references for Alzheimer's disease research | JavaScript | View |
| AD-TF | Complete, executable workflow for identifying transcription factors (TFs) that drive chromatin accessibility changes in Alzheimer's disease | R | View |
| nlp_gen_dementia | NLP tool for mining genetic associations across dementia subtypes from biomedical literature | Jupyter Notebook | View |
| Name | Description | Tech | Link |
|---|---|---|---|
| searchX | Tool integrating multi-omics data search, clinical variant interpretation, and collaborative research tools | Python | View |
| scopeR | Causality-Integrated Visualization Framework for Multi-Omics Data analysis and interpretation | R | View |
| Weave | Weave™ Enterprise Bioinformatics Integration Platform | Java | View |
| infOnyx | Forging causality from high-dimensional data to uncover biological mechanisms: a shift beyond association | R | View |
| Name | Description | Tech | Link |
|---|---|---|---|
| UStatDecouple | Probabilistic Decoupling of U-Statistics for advanced statistical analysis | R | View |
| layr | Built on a Grammar of Visual Semantics. Focuses not just on how to draw a chart, but on how the chart communicates information | R | View |
| Name | Description | Tech | Link |
|---|---|---|---|
| DeepLearningFundamentals | Comprehensive introduction to deep learning concepts and applications in bioinformatics | Jupyter Notebook | View |
| foundation-of-biology | Life as a non-equilibrium thermodynamic system that maintains itself through continuous energy-dependent information processing | LaTeX | View |