Package index

All functions

bioga_main_cpp()

Main genetic algorithm loop for genomic data optimization

crossover_cpp()

Function to perform simulated binary crossover (SBX)

evaluate_fitness_cpp()

Function to evaluate fitness using genomic data with multi-objective support

initialize_population_cpp()

Function to initialize population with optional gene clustering

mutation_cpp()

Function to mutate offspring with adaptive mutation and network constraints

replacement_cpp()

Function to replace population with elitism and diversity preservation

selection_cpp()

Function to select individuals using NSGA-II non-dominated sorting